Publication
Aspergillus section Fumigati – Epidemiological trends - A perspective from a National Reference Laboratory
| dc.contributor.author | Sabino, Raquel | |
| dc.contributor.author | Simões, Helena | |
| dc.contributor.author | Francisco, Mariana | |
| dc.contributor.author | Viegas, Carla | |
| dc.contributor.author | Toscano, Cristina | |
| dc.contributor.author | Batista, JuditeTeresa | |
| dc.contributor.author | Ferreira, Teresa | |
| dc.contributor.author | Veríssimo, Cristina | |
| dc.date.accessioned | 2018-03-02T15:53:09Z | |
| dc.date.available | 2018-03-02T15:53:09Z | |
| dc.date.issued | 2017-10 | |
| dc.description | Poster abstract publicado em: Mycoses. 2017;60(Suppl. S2):131-132. Disponível em:http://onlinelibrary.wiley.com/doi/10.1111/myc.12675/epdf | pt_PT |
| dc.description.abstract | Objectives: Aspergillus fumigatus is the most frequent agent of aspergilosis and reports on infections caused by this species or its siblings are becoming more frequent, together with the increasing number of at risk patients. Nowadays, due to the rising concerns on emerging antifungal resistance, the epidemiological surveillance for clinical and environmental isolates is mandatory. The overall objective of the project is to understand the epidemiology of the Aspergillus isolates (species and antifungal resistance) collected in the Portuguese National Reference Laboratory through our surveillance system on Aspergillus. Methods: During the period 2013-2017, 117 Aspergillus section Fumigati isolates were collected at the National Health Reference Dr. Ricardo Jorge, through the surveillance system on Aspergillus. Isolates were obtained from different patient samples from 15 healthcare institutions of all country, and from different environmental sources (air or surfaces sampling). All isolates were plated for growth as single colonies on malt extract agar with chloramphenicol. These isolates were identified on the basis of macro and microscopic morphology and through the use of molecular tools. Genomic DNA was prepared from each isolate and the sequencing of the Internal Transcribed Spacers (ITS) regions as well as of the gene codifying to calmodulin. Surveillance of azole resistance was performed firstly using Sabouraud dextrose agar supplemented with itraconazole (ICZ), voriconazole (VCZ), and posaconazole (PCZ). When growth was observed, the minimal inhibitory concentration (MIC) was determined by broth microdilution method. In case of doubt, a specific PCR for detection of mutations in the Cyp51A gene of A. fumigatus was performed using the AsperGenius® multiplex real-time PCR assay. Results: From the isolates collected during the study period, 94 were from clinical (human) sources, 2 from animals diagnosed with aspergillosis and 21 from environmental sources Clinical isolates were obtained from 90 patients (53 males, 34 females, 3 not known), with ages ranging from 37 days to 88 years old. Most of these isolates (98%) were from respiratory specimens. The underlying diseases reported are, among others, cystic fibrosis, COPD, HIV, asthma, and neoplasms. In total, 111 A. fumigatus sensu stricto isolates were identified, followed by 3 A. lentulus, 2 A. felis and 1 A. hiratsukae (from hospital environment). In 7 cases, the morphological identification did not matched with the correct species-section. Interestingly, the 5 clinical cryptic species were from the same hospital. Regarding susceptibility, relevant and residual growths were obtained in azole resistance screening media (Table 1). The positive results were then screened by microdilutions and by detection of Cyp51A mutations and resistances were not confirmed. Conclusions: The understanding of local resistance patterns is valuable to assess shifts in the epidemiology of Aspergillus (and therefore, to manage therapeutic approaches). In our collection of Fumigati isolates, 5% of them were cryptic species. Although we did not confirm azole resistance by microdilution or detection of Cyp51A mutations, the MIC values obtained suggest that the median values are higher than what is described in other studies (1.4 to ICZ, 0.4 to PCZ),which may explain the growth in screening media and may suggest a local epidemiology. | pt_PT |
| dc.description.version | info:eu-repo/semantics/publishedVersion | pt_PT |
| dc.identifier.uri | http://hdl.handle.net/10400.18/5132 | |
| dc.language.iso | eng | pt_PT |
| dc.peerreviewed | yes | pt_PT |
| dc.rights.uri | http://creativecommons.org/licenses/by-nc/4.0/ | pt_PT |
| dc.subject | Aspergillus Fumigatus | pt_PT |
| dc.subject | Section Fumigati | pt_PT |
| dc.subject | Cryptic Species | pt_PT |
| dc.subject | Antifungal Susceptibility | pt_PT |
| dc.subject | Infecções Sistémicas e Zoonoses | |
| dc.title | Aspergillus section Fumigati – Epidemiological trends - A perspective from a National Reference Laboratory | pt_PT |
| dc.type | conference object | |
| dspace.entity.type | Publication | |
| oaire.citation.conferencePlace | Belgrado, Sérvia | pt_PT |
| oaire.citation.title | 8th Trends in Medical Mycology, EORTC-IDG/ECMM, 6-9 October 2017 | pt_PT |
| rcaap.rights | openAccess | pt_PT |
| rcaap.type | conferenceObject | pt_PT |