Browsing by Author "Matos, Filipa"
Now showing 1 - 3 of 3
Results Per Page
Sort Options
- Antimicrobial susceptibility and oxymino-β-lactam resistance mechanisms in Salmonella enterica and Escherichia coli isolates from different animal sourcesPublication . Clemente, Lurdes; Manageiro, Vera; Jones-Dias, Daniela; Correia, Ivone; Themudo, Patricia; Albuquerque, Teresa; Geraldes, Margarida; Matos, Filipa; Almendra, Cláudia; Ferreira, Eugénia; Caniça, ManuelaThe impact of extended-spectrum β-lactamases (ESBLs) and plasmid-mediated AmpC β-lactamases (PMAβs) of animal origin has been a public health concern. In this study, 562 Salmonella enterica and 598 Escherichia coli isolates recovered from different animal species and food products were tested for antimicrobial resistance. Detection of ESBL-, PMAβ-, plasmid-mediated quinolone resistance (PMQR)-encoding genes and integrons was performed in isolates showing non-wild-type phenotypes. Susceptibility profiles of Salmonella spp. isolates differed according to serotype and origin of the isolates. The occurrence of cefotaxime non-wild-type isolates was higher in pets than in other groups. In nine Salmonella isolates, blaCTX-M (n = 4), blaSHV-12 (n = 1), blaTEM-1 (n = 2) and blaCMY-2 (n = 2) were identified. No PMQR-encoding genes were found. In 47 E. coli isolates, blaCTX-M (n = 15), blaSHV-12 (n = 2), blaCMY-2 (n = 6), blaTEM-type (n = 28) and PMQR-encoding genes qnrB (n = 2), qnrS (n = 1) and aac(6')-Ib-cr (n = 6) were detected. To the best of our knowledge, this study is the first to describe the presence of blaCMY-2 (n = 2) and blaSHV-12 (n = 1) genes among S. enterica from broilers in Portugal. This study highlights the fact that animals may act as important reservoirs of isolates carrying ESBL-, PMAβ- and PMQR-encoding genes that might be transferred to humans through direct contact or via the food chain.
- Antimicrobial susceptibility of Escherichia coli strains isolated from food-producing, companion and wild animals, in Portugal – Characterization of isolates with reduced susceptibility to third generation cephalosporins and cephamycinsPublication . Clemente, Lurdes; Manageiro, Vera; Jones-Dias, Daniela; Ferreira, Eugénia; Correia, Ivone; Albuquerque, Teresa; Geraldes, Margarida; Matos, Filipa; Almendra, Claúdia; Themudo, Patrícia; Caniça, ManuelaEscherichia coli is a common inhabitant of the gastrointestinal tract of humans and animals, but is also a causative agent of diarrhea and extraintestinal infections. There is ongoing concern about the risks posed to human health by antimicrobial resistant bacteria isolated from animals. This study was conducted on 602 Escherichia coli isolates recovered from food-producing (n=217), companion (n=114) and wild animals (n=271), over the period of 2009-2013, to determine their antimicrobial susceptibility to a panel of ten antimicrobials (ampicillin, cefotaxime, ciprofloxacin, nalidixic acid, trimethoprim, sulfamethoxazole, chloramphenicol, streptomycine, gentamicine and tetracycline), through the determination of Minimum Inhibitory Concentration (MIC), using the agar dilution technique. Susceptibility to cefoxitin was determined through disk diffusion method. Molecular characterization of isolates showing a non-wild type MIC to cefotaxime was performed, to determine extended spectrum β-lactamases (ESBL), plasmid mediated AmpC (PMAβ), plasmid mediated quinolone (PMQR) resistance determinants and mobile genetic elements involved in the dissemination of resistance genes. Overall, isolates recovered from food producing animals showed higher frequencies of resistance towards all antimicrobials tested and multidrug resistance (MDR) (53%), followed by companion (43%) and wild animals (30%). Fifty isolates presented a non-wild phenotype to cefotaxime and resistance or intermediate susceptibility to cefoxitin, being 14 (12.3%) from pets, 19 (8.8%) from food producing animals and 17 (6.3%) from wild animals. Polymerase chain reaction and sequencing of the amplicons confirmed the presence of blaCTX-M-type (n=14), blaSHV-type (n=2), blaTEM-type (n=31), blaOXA-type (n=6) and plasmid-mediated AmpC β-lactamases (PMAβ) genes (n=8). Plasmid-mediated quinolone resistance-encoding genes were detected in ten isolates: aac(6')-Ib-cr (n=6) qnrB17 (n=1), qnrS1(n=1) and qnrB19 (n=2). Twenty five isolates carried class 1 integrons and two carried class 2 integrons. This study agrees that animals may act as important reservoirs of E. coli isolates carrying ESBL and PMAβ-encoding genes, which might be transmissible to humans through direct contact or the food chain and, a potential source for human pathogens to acquire these resistance genes.
- Diversity of β-lactamase-encoding genes in Escherichia coli strains isolated from food-producing, companion and zoo animals in PortugalPublication . Clemente, Lurdes; Correia, Ivone; Albuquerque, Teresa; Geraldes, Margarida; Matos, Filipa; Themudo, Patrícia; Manageiro, Vera; Jones-Dias, Daniela; Ferreira, Eugénia; Caniça, ManuelaA rapid development of plasmid-mediated resistance to extended-spectrum cephalosporins has been observed in Enterobacteriaceae worldwide, predominantly due to the dissemination of extended-spectrum beta-lactamases (ESBL) and plasmid-mediated AmpC beta-lactamases (PMAB). The aim of the present study was to evaluate the extension of ESBL- and PMAB-producing E. coli strains isolated from different animal origins in Portugal. For surveillance purposes, 376 E. coli isolates identified at National Laboratory of Veterinary Research (2009-2011) were submitted to antimicrobial susceptibility testing: 123, 51 and 202 were isolated from food-producing, companion and zoo animals, respectively. Minimum Inhibitory Concentrations (MIC) of 11 antimicrobials for all isolates was determined through agar dilution method. Susceptibility towards cefoxitina was determined through disk diffusion method. Breakpoints were interpreted accordingly to EUCAST epidemiological cut-off values. ‘Non-wild type’ (NWT) isolates for cefotaxime (MIC>0.25mg/L) and/or cefoxitina (<19mm) were screened for the presence of ESBL (blaTEM, blaOXA, blaSHV, blaCTX) and PMAB encoding genes, using PCR method. Sequencing was applied to fully identify beta-lactamases. Seventeen isolates (4.5%) were ‘NWT’ strains for cefotaxime, being 5 (29.4%) from companion animals, 4 (23.5%) from food-producing animals and 8 (47.1%) from zoo animals. We identified blaCTX-M-14 (n=1) in a dog and blaCTX-M-15-type genes (n=9) in 6 zoo animals and 3 in food-producing animals. We also identified blaCMY-type genes (n=3) in ‘NWT’ isolates for cefoxitin, one from each animal category. Other beta-lactamase encoding genes were identified: blaOXA in 5 strains (29.4%) isolated from dolphins, blaTEM in 7 strains (41.2%) isolated from 3 companion animals, 2 food-producing and 2 zoo animals, and blaSHV identified in one isolate (5.9%) from a zoo animal; 13 beta-lactamase-producing isolates (76.5%) were multidrug resistant. Among ‘NWT’ E. coli isolates for cefotaxime, we identified an important diversity of ESBL encoding genes, belonging to different families, being blaCTX-M-15-type gene the predominant. The spread of ESBL-producing bacteria among species from different origins, such as food-producing, companion and zoo animals, is a concern at public health level. Thus, it should be a priority to monitor and identify the reservoirs of antimicrobial resistance, contributing to a single health for all.