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Phenotypic and genomic characterization of azole resistance in Portuguese isolates

dc.contributor.authorPapuc, Alexandru-Marian
dc.contributor.authorVeríssimo, Cristina
dc.contributor.authorSimões, Helena
dc.contributor.authorToscano, Cristina
dc.contributor.authorGomes, João Paulo
dc.contributor.authorMixão, Verónica
dc.contributor.authorSabino, Raquel
dc.date.accessioned2026-02-20T12:12:57Z
dc.date.available2026-02-20T12:12:57Z
dc.date.issued2025-12-10
dc.description.abstractIntroduction: Candida parapsilosis is a clinically important etiological agent of systemic infections associated with hospital outbreaks, which prevalence has been increasing in the last decade. Moreover, in recent years, fluconazole resistance in this species has been emerging in different countries, being a subject of significant interest and concern. In this context, the present study aims to determine the frequency of fluconazole resistance in C. parapsilosis sensu stricto isolates collected in Portugal (2003-2007 and 2017-2024), understand its associated molecular mechanisms, and relate it all with worldwide genomic data. Methods: To this end, we performed phenotypic assays of 145 isolates of C. parapsilosis collected from different biological and environmental products in Portugal (majority from the Lisbon Metropolitan area), and explored the genomic features of the fluconazole-resistant ones. Results: We found eight C. parapsilosis fluconazole-resistant isolates between 2017 and 2024, corresponding to a frequency of 8.5% in this period, and contrasting with the absence of fluconazole-resistant isolates collected before 2007. Sequencing of the ERG11 gene showed that all fluconazole-resistant isolates had the Y132F and R398I mutations. Discussion: A phylogenomic analysis including publicly available isolates from other countries revealed that our Portuguese isolates are more closely related to those from the USA and Germany than to the isolates sequenced thus far from the neighbor country, Spain. Furthermore, although three distinct C. parapsilosis genetic clades were found in our dataset, all the fluconazole-resistant isolates detected in this study cluster together, raising the question of whether the increased fluconazole-resistance in the country could possibly be associated with the emergence or introduction of this particular lineage. Altogether, these results provide valuable insights on fluconazole resistance in a set of Portuguese C. parapsilosis isolates and their associated mechanisms, representing an important step towards a better understanding of the increasing C. parapsilosis fluconazole resistance in Southern Europe.por
dc.description.sponsorshipThis work was supported by national funds through research the Foundation for Science and Technology (FCT), I.P., in the frame of the Project “MycoSurveil” (grant number 2023.12824.PEX) and of Individual CEEC 2022.00851.CEECIND/CP1748/CT0001 and also under the frame of iMed.ULisboa funding (UID/04138/2025) DOI: (https://doi.org/10.54499/UID/04138/2025).
dc.identifier.citationFront Fungal Biol. 2025 Dec 10:6:1713961. doi: 10.3389/ffunb.2025.1713961. eCollection 2025
dc.identifier.doi10.3389/ffunb.2025.1713961
dc.identifier.eissn2673-6128
dc.identifier.pmid41450758
dc.identifier.urihttp://hdl.handle.net/10400.18/10962
dc.language.isoen
dc.peerreviewedyes
dc.publisherFrontiers Media
dc.relationMycoSurveil - An innovative approach towards the genomics-based surveillance of fungal pathogens
dc.relation.hasversionhttps://www.frontiersin.org/journals/fungal-biology/articles/10.3389/ffunb.2025.1713961/full
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subjectCandida parapsilosis
dc.subjectERG11
dc.subjectFluconazole
dc.subjectResistance
dc.subjectWhole-genome Sequencing
dc.subjectInfecções Sexualmente Transmissíveis
dc.titlePhenotypic and genomic characterization of azole resistance in Portuguese isolatespor
dc.typejournal article
dcterms.referenceshttps://www.frontiersin.org/journals/fungal-biology/articles/10.3389/ffunb.2025.1713961/full#supplementary-material
dspace.entity.typePublication
oaire.awardTitleMycoSurveil - An innovative approach towards the genomics-based surveillance of fungal pathogens
oaire.awardURIhttp://hdl.handle.net/10400.18/10961
oaire.citation.startPage1713961
oaire.citation.titleFrontiers in Fungal Biology
oaire.citation.volume6
oaire.fundingStreamConcurso de Projetos Exploratórios em Todos os Domínios Científicos 2023
oaire.versionhttp://purl.org/coar/version/c_970fb48d4fbd8a85
relation.isProjectOfPublication2015c810-79c3-402e-9e16-ef45f6af98df
relation.isProjectOfPublication.latestForDiscovery2015c810-79c3-402e-9e16-ef45f6af98df

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