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Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

2020-08Journal article Open access
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dc.contributor.authorAlm, Erik
dc.contributor.authorBroberg, Eeva K
dc.contributor.authorConnor, Thomas
dc.contributor.authorHodcroft, Emma B
dc.contributor.authorKomissarov, Andrey B
dc.contributor.authorMaurer-Stroh, Sebastian
dc.contributor.authorMelidou, Angeliki
dc.contributor.authorNeher, Richard A
dc.contributor.authorO’Toole, Áine
dc.contributor.authorPereyaslov, Dmitriy
dc.contributor.authorWHO European Region sequencing laboratories and GISAID EpiCoV group
dc.contributor.authorWHO European Region sequencing laboratories and GISAID EpiCoV group
dc.date.accessioned2021-05-06T17:51:39Z
dc.date.available2021-05-06T17:51:39Z
dc.date.issued2020-08
dc.descriptionThe WHO European Region sequencing laboratories and GISAID EpiCoV group: INSA - Vítor Borges, Joana Isidro, João Paulo Gomes, Raquel Guiomar, Pedro Pechirra, Inês Costa, Sílvia Duarte, Luís Vieirapt_PT
dc.description.abstractWe show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationEuro Surveill. 2020 Aug;25(32):2001410. doi: 10.2807/1560-7917.ES.2020.25.32.2001410pt_PT
dc.identifier.doi10.2807/1560-7917.ES.2020.25.32.2001410pt_PT
dc.identifier.issn1560-7917
dc.identifier.urihttp://hdl.handle.net/10400.18/7722
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherEuropean Centre for Disease Prevention and Controlpt_PT
dc.relation.publisherversionhttps://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2020.25.32.2001410pt_PT
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/pt_PT
dc.subjectBase Sequencept_PT
dc.subjectBetacoronaviruspt_PT
dc.subjectCOVID-19pt_PT
dc.subjectCoronaviruspt_PT
dc.subjectCoronavirus Infectionspt_PT
dc.subjectEuropept_PT
dc.subjectGenome, Viralpt_PT
dc.subjectHumanspt_PT
dc.subjectPhylogeographypt_PT
dc.subjectPneumonia, Viralpt_PT
dc.subjectRNA, Viralpt_PT
dc.subjectRNA-Dependent RNA Polymerasept_PT
dc.subjectSARS-CoV-2pt_PT
dc.subjectSevere Acute Respiratory Syndromept_PT
dc.subjectSpatio-Temporal Analysispt_PT
dc.subjectWorld Health Organizationpt_PT
dc.subjectPandemicspt_PT
dc.subjectWGSpt_PT
dc.subjectWhole Genome Sequencingpt_PT
dc.subjectNomenclaturept_PT
dc.subjectSequencingpt_PT
dc.subjectInfecções Respiratóriaspt_PT
dc.titleGeographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020pt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.citation.issue32pt_PT
oaire.citation.startPage2001410pt_PT
oaire.citation.titleEurosurveillancept_PT
oaire.citation.volume25pt_PT
rcaap.embargofctAcesso de acordo com política editorial da revistapt_PT
rcaap.rightsopenAccesspt_PT
rcaap.typearticlept_PT

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