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Please use this identifier to cite or link to this item: http://hdl.handle.net/10400.18/875

Title: A new function of ROD1 in nonsense-mediated mRNA decay
Authors: Brazão, Tiago França
Demmers, J.
van IJcken, W.
Strouboulis, J.
Fornerod, M.
Romão, Luísa
Grosveld, F.G.
Keywords: Doenças Genéticas
Genómica Funcional e Estrutural
Issue Date: 21-Mar-2012
Publisher: Elsevier
Citation: FEBS Lett. 2012 Apr 24;586(8):1101-10. Epub 2012 Mar 21
Abstract: RNA-binding proteins play a crucial role in the post-transcriptional regulation of gene expression. Polypyrimidine tract binding protein (PTB in humans) has been extensively characterized as an important splicing factor, and has additional functions in 3' end processing and translation. ROD1 is a PTB paralog containing four RRM (RNA recognition motif) domains. Here, we discover a function of ROD1 in nonsense-mediated mRNA decay (NMD). We show that ROD1 and the core NMD factor UPF1 interact and co-regulate an extensive number of target genes. Using a reporter system, we demonstrate that ROD1, similarly to UPF1 and UPF2, is required for the destabilization of a known NMD substrate. Finally, we show through RIP-seq that ROD1 and UPF1 associate with a significant number of common transcripts.
Peer Reviewed: yes
URI: http://hdl.handle.net/10400.18/875
ISSN: 014-5793
Publisher version: http://ac.els-cdn.com/99F2182F-294D-4EFC-8ADD-3E43FB18B5DB/FinalDownload/DownloadId-CA388036D3AE994DE22B17E2E652CDCD/99F2182F-294D-4EFC-8ADD-3E43FB18B5DB/S0014579312002025/1-s2.0-S0014579312002025-main.pdf?_tid=03033ad3280936bbee217fb38404abe4&acdnat=1341414077_fc59747c105616bebbdcef26b8a8c5a9
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